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Cytometry Development Workshop
Lab Research Topics
Murphy Lab - Software - Proceedings of the 2011 IEEE International Symposium on Biomedical Imaging
The software and data used for the following paper can be downloaded below:
A. Shariff, R.F. Murphy, and G. Rohde (2011) Automated Estimation of Microtubule Model Parameters from 3-D Live Cell Microscopy Images. Proceedings of the 2011 IEEE International Symposium on Biomedical Imaging (ISBI 2011), pp. 1330-1333.
The data and code are contained in .tgz files:
Generating the Figures from the Article
From Intermediate Results
To generate the figures using the intermediate
results, download the intermediate results from the links
above. To concatenate and untar type in the command line
From Raw Data
To generate the figures using raw data, download the image collection from the link above. Extract the images and move the contents of this folder into the source code folder. Then run masterscript from within Matlab.
TestsThis package has been tested in the following Matlab versions.
Last Updated: 05 Nov 2012
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