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Cytometry Development Workshop
Lab Research Topics
Murphy Lab - Software - Cytometry Part A
The software and data used for the following paper can be downloaded below:
A. Shariff, G. K. Rohde and R. F. Murphy (2010) A Generative Model of Microtubule Distributions, and Indirect Estimation of its Parameters from Fluorescence Microscopy Images. Cytometry Part A 77A:457-466.
The data and code are contained in .tgz files:
Generating the Figures from the Article
From Intermediate Results
To generate the figures using the intermediate
results, download the intermediate results from the link
above. To concatenate and untar type in the command line
From Raw Data
To generate the figures using raw data, download the image collection from the link above. Extract the images and move the contents of this folder into the source code folder. Then run masterscript from within Matlab.
TestsThis package has been tested in the following Matlab versions.
Last Updated: 12 Mar 2012
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