Murphy Lab

Home
Information
People
Addresses
Cytometry Development Workshop
FCS API

Research
Projects
Publications
Software
Presentations
Flow Cytometry

Affiliations
Carnegie Mellon University
Lane Center for Computational Biology
Center for Bioimage Informatics
Biological Sciences Department
Biomedical Engineering Department
Machine Learning Department
MBIC

Murphy Lab - Software - ISBI 2009 Nuclear Segmentation

The data and software used for the following paper will be available upon publication:

L.P. Coelho, A. Shariff and R. F. Murphy (2009). Nuclear segmentation in microsope cell images: A hand-segmented dataset and comparison of algorithms. Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging (ISBI 2009), pp. 518-521.

The data and python code can be downloaded here (170 MB).

System requirements

The scripts were written for python version 2.5.

Last Updated: 08 Jul 2009