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Murphy Lab - Software - Bioinformatics 2001


Archives of all Software

boland_murphy_bioinfo_2001.tgz
boland_murphy_bioinfo_2001.zip

Matlab Scripts for Image Processing

mb_hela_v01.m
mb_imgcommonpixel.m
mb_imgbgsub.m
mb_cropthresh.m
mb_imgscale.m
mb_imgshift.m
mb_nihscale.m
mb_nihthreshold.m

Matlab Scripts for Feature Calculation

mb_imgconvhull.m
mb_imgfeatures.m
mb_hullfeatures.m
mb_zernike.m
mb_Vnl.m
mb_imgedgefeatures.m
mb_imgmoments.m
mb_imgcentmoments.m
mb_factorial.m

C++ code for Zernike Feature Calculation

Note that this code is used in conjunction with the mb_zernike.m file.
mb_Znl.cpp

C code for Haralick Feature Calculation

mb_texture.c
cvip_pgmtexture.c
CVIPdef.h
CVIPtexture.h
CVIPtyp.h
ppbm.h
ppbmplus.h
ppgm.h

Matlab scripts for Neural Network Training/Testing

Note that these scripts depend on the Netlab package.
mb_mlptrainstoptest.m
mb_mlptrainstoptestsets.m
mb_mlpsets.m
mb_mlptraintest.m
mb_mlptrain.m
mb_featurenorm.m
mb_mlpfinalreport.m
mb_mlpthreshtest.m
mb_mlpconfmatall.m
mb_mlpclasssummary.m
mb_latextable.m
mb_misclassnamesprint.m
mb_misclassnames.m
mb_mlpthresh.m
mb_mlpconfmat.m




Last Updated: 01 Dec 2004




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